TSS: Hg 103079.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=HGNC:3623 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=10 | ||
|end=134917932 | |end=134917932 | ||
|end_of_center_position=134917903 | |end_of_center_position=134917903 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_002003 | |nearest_refseq=NM_002003 | ||
|nearest_unigene=Hs.440898 | |nearest_unigene=Hs.440898 | ||
|num_trans= | |num_trans=2219 | ||
|species=human | |species=human | ||
|start=134917872 | |start=134917872 | ||
|start_of_center_position=134917902 | |start_of_center_position=134917902 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000616356.4 | |transcript_name=ENST00000371806.4 ENST00000616356.4 CR749452 BC020635 AK314867 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_103079.1 | |tss_id=hg_103079.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A0A087WVE2 Q68DD1 | |uniprot_id=A0A087WVE2 O00602 Q68DD1 | ||
}} | }} | ||
Latest revision as of 18:41, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 10 |
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| Nearest PromoterID: | NM_002003 |
| Entrez ID: | 2219 |
| Nearest Unigene: | Hs.440898 |
| Nearest Refseq: | NM_002003 |
| Nearest Ensembl: | ENSG00000085265 |
| Gene Name: | ficolin 1 |
| Gene Alias: | FCNM |
| Gene Description: | ficolin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.