TSS: Hg 100484.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|E2-CDC34B= | |||
|UBC3B= | |||
|chr=chr9 | |||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=614 | |||
|end=33817779 | |||
|end_of_center_position=33817774 | |||
|entrez_id=54926 | |entrez_id=54926 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
|gene_alias=CDC34B | |gene_alias=CDC34B{{!}}E2-CDC34B{{!}}UBC3B | ||
|gene_description=ubiquitin conjugating enzyme E2 R2 | |gene_description=ubiquitin conjugating enzyme E2 R2 | ||
|gene_name=UBE2R2 | |gene_name=UBE2R2 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_017811 | |nearest_refseq=NM_017811 | ||
|nearest_unigene=Hs.643648 | |nearest_unigene=Hs.643648 | ||
|num_trans=0 | |||
|species=human | |||
|start=33817768 | |||
|start_of_center_position=33817773 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_100484.1 | |tss_id=hg_100484.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:18, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 614 |
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| Nearest PromoterID: | NM_017811 |
| Entrez ID: | 54926 |
| Nearest Unigene: | Hs.643648 |
| Nearest Refseq: | NM_017811 |
| Nearest Ensembl: | ENSG00000107341 |
| Gene Name: | UBE2R2 |
| Gene Alias: | CDC34B|E2-CDC34B|UBC3B |
| Gene Description: | ubiquitin conjugating enzyme E2 R2 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |