TSS: Hg 100485.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|E2-CDC34B= | |||
|UBC3B= | |||
|all_trans=HGNC:49911 | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance_to_tss= | |distance=-266 | ||
|distance_to_tss=1368 | |||
|end=33818529 | |||
|end_of_center_position=33818528 | |||
|entrez_id=54926 | |entrez_id=54926 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
|gene_alias=CDC34B | |gene_alias=CDC34B{{!}}E2-CDC34B{{!}}UBC3B | ||
|gene_description=ubiquitin conjugating enzyme E2 R2 | |gene_description=ubiquitin conjugating enzyme E2 R2 | ||
|gene_name=UBE2R2 | |gene_id= | ||
|gene_name=UBE2R2 antisense RNA 1 | |||
|gene_source=HGNC:49911 | |||
|gene_symbol=UBE2R2-AS1 | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:49911 | |||
|nearest_ensembl=ENSG00000107341 | |nearest_ensembl=ENSG00000107341 | ||
|nearest_promoter_id=NM_017811 | |nearest_promoter_id=NM_017811 | ||
|nearest_refseq=NM_017811 | |nearest_refseq=NM_017811 | ||
|nearest_unigene=Hs.643648 | |nearest_unigene=Hs.643648 | ||
|num_trans= | |||
|species=human | |||
|start=33818526 | |||
|start_of_center_position=33818527 | |||
|strand=- | |||
|transcript_name=ENST00000454429.2 | |||
|tss_classification=yes | |||
|tss_id=hg_100485.1 | |tss_id=hg_100485.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Latest revision as of 17:44, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1368 |
|---|---|
| Nearest PromoterID: | NM_017811 |
| Entrez ID: | 54926 |
| Nearest Unigene: | Hs.643648 |
| Nearest Refseq: | NM_017811 |
| Nearest Ensembl: | ENSG00000107341 |
| Gene Name: | UBE2R2 antisense RNA 1 |
| Gene Alias: | CDC34B|E2-CDC34B|UBC3B |
| Gene Description: | ubiquitin conjugating enzyme E2 R2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.