TSS: Hg 100486.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=6473 |entrez_id=55833 |gc_percent=0.497512 |gene_alias=UBAP-2 |gene_description=ubiquitin associated protein 2 |gene_name=UBAP2...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=6411 | |||
|end=34042478 | |||
|end_of_center_position=34042477 | |||
|entrez_id=55833 | |entrez_id=55833 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000137073 | |nearest_ensembl=ENSG00000137073 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001370066 | ||
|nearest_refseq=NM_018449 | |nearest_refseq=NM_018449 | ||
|nearest_unigene=Hs.493739 | |nearest_unigene=Hs.493739 | ||
|num_trans=0 | |||
|species=human | |||
|start=34042474 | |||
|start_of_center_position=34042476 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100486.1 | |tss_id=hg_100486.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 15:20, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 6411 |
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| Nearest PromoterID: | NM_001370066 |
| Entrez ID: | 55833 |
| Nearest Unigene: | Hs.493739 |
| Nearest Refseq: | NM_018449 |
| Nearest Ensembl: | ENSG00000137073 |
| Gene Name: | UBAP2 |
| Gene Alias: | UBAP-2 |
| Gene Description: | ubiquitin associated protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.497512 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |