TSS: Mm 97880.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=MGI:2144254 MGI:3651774 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 12: | Line 12: | ||
|gene_description=expressed sequence AI662270 | |gene_description=expressed sequence AI662270 | ||
|gene_id=100043636 | |gene_id=100043636 | ||
|gene_name=expressed sequence AI662270 | |gene_name=expressed sequence AI662270; predicted gene 11427 | ||
|gene_source=MGI:2144254 | |gene_source=MGI:2144254 MGI:3651774 | ||
|gene_symbol=AI662270 | |gene_symbol=AI662270 Gm11427 | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=MGI:2144254 | |hgnc_mgi_id=MGI:2144254 MGI:3651774 | ||
|nearest_ensembl=ENSMUSG00000087107 | |nearest_ensembl=ENSMUSG00000087107 | ||
|nearest_promoter_id=NR_015519 | |nearest_promoter_id=NR_015519 | ||
|nearest_refseq=NR_015519 | |nearest_refseq=NR_015519 | ||
|nearest_unigene=Mm.295569 | |nearest_unigene=Mm.295569 | ||
|num_trans= | |num_trans=100043636 | ||
|species=mouse | |species=mouse | ||
|start=83224439 | |start=83224439 | ||
|start_of_center_position=83224465 | |start_of_center_position=83224465 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK136560 AK079892 AK079857 | |transcript_name=ENSMUST00000216233.1 ENSMUST00000214346.1 AK136560 AK079892 AK079857 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_97880.1 | |tss_id=mm_97880.1 | ||
Latest revision as of 18:51, 28 July 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 889 |
|---|---|
| Nearest PromoterID: | NR_015519 |
| Entrez ID: | 100043636 |
| Nearest Unigene: | Mm.295569 |
| Nearest Refseq: | NR_015519 |
| Nearest Ensembl: | ENSMUSG00000087107 |
| Gene Name: | expressed sequence AI662270; predicted gene 11427 |
| Gene Alias: | AW496474 |
| Gene Description: | expressed sequence AI662270 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.432836 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.