TSS: Mm 104927.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=MGI:1925164 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001099774 | |nearest_refseq=NM_001099774 | ||
|nearest_unigene=Mm.293692 | |nearest_unigene=Mm.293692 | ||
|num_trans= | |num_trans=77914 | ||
|species=mouse | |species=mouse | ||
|start=99993992 | |start=99993992 | ||
|start_of_center_position=99993994 | |start_of_center_position=99993994 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-33(GGATATAAAAGC,-,0.00) | ||
|transcript_name=ENSMUST00000105049.1 | |transcript_name=ENSMUST00000105049.1 AK020698 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_104927.1 | |tss_id=mm_104927.1 | ||
Latest revision as of 12:17, 26 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -1 |
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| Nearest PromoterID: | NM_001099774 |
| Entrez ID: | 77914 |
| Nearest Unigene: | Mm.293692 |
| Nearest Refseq: | NM_001099774 |
| Nearest Ensembl: | ENSMUSG00000078252 |
| Gene Name: | keratin associated protein 17-1 |
| Gene Alias: | A030006P16Rik |
| Gene Description: | keratin associated protein 17-1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(GGATATAAAAGC,-,0.00) |
TSS expression
Expression data not found.