TSS: Hg 152302.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000570539.1:-112 | |TCEB2= | ||
|all_trans=LF340678:-64 MA576255:-64 LF340680:78 MA576257:78 ENST00000570539.1:-112 LF340681:202 MA576258:202 ENST00000573583.2:247 LF340682:334 MA576259:334 LF340677:-377 MA576254:-377 LF385541:383 MA621118:383 | |||
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=- | |distance=-64 | ||
|distance_to_tss= | |distance_to_tss=6253 | ||
|end=2771031 | |end=2771031 | ||
|end_of_center_position=2771027 | |||
|entrez_id=6923 | |entrez_id=6923 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
|gene_alias=SIII | |gene_alias=SIII{{!}}TCEB2 | ||
|gene_description=elongin B | |gene_description=elongin B | ||
|gene_id=23524 | |gene_id=23524 | ||
|gene_name= | |gene_name=ELOB | ||
|gene_source=HGNC:16639 | |gene_source=HGNC:16639 | ||
|gene_symbol=SRRM2 | |gene_symbol=SRRM2 | ||
| Line 21: | Line 23: | ||
|nearest_refseq=NM_007108 | |nearest_refseq=NM_007108 | ||
|nearest_unigene=Hs.172772 | |nearest_unigene=Hs.172772 | ||
|num_trans= | |num_trans=14 | ||
|species=human | |species=human | ||
|start=2771022 | |start=2771022 | ||
|start_of_center_position=2771026 | |||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name=LF340678 MA576255 | ||
|tss_classification= | |tss_classification=yes | ||
|tss_id=hg_152302.1 | |tss_id=hg_152302.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=I3L1W5 | |uniprot_id=I3L1W5 | ||
}} | }} | ||
Latest revision as of 11:21, 13 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 6253 |
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| Nearest PromoterID: | NM_007108 |
| Entrez ID: | 6923 |
| Nearest Unigene: | Hs.172772 |
| Nearest Refseq: | NM_007108 |
| Nearest Ensembl: | ENSG00000103363 |
| Gene Name: | ELOB |
| Gene Alias: | SIII|TCEB2 |
| Gene Description: | elongin B |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.