TSS: Mm 99962.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=MGI:1925438 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=-102 | ||
|end=113684026 | |end=113684026 | ||
|end_of_center_position=113684024 | |end_of_center_position=113684024 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.751244 | |gc_percent=0.751244 | ||
|gene_alias=D11Wsu99e | |gene_alias=D11Wsu99e | ||
|gene_description= | |gene_description=family with sequence similarity 104, member A | ||
|gene_id=78188 | |gene_id=78188 | ||
|gene_name=RIKEN cDNA 4930539H15 gene | |gene_name=RIKEN cDNA 4930539H15 gene | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=MGI:1925438 | |hgnc_mgi_id=MGI:1925438 | ||
|nearest_ensembl=ENSMUSG00000041629 | |nearest_ensembl=ENSMUSG00000041629 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001362751 | ||
|nearest_refseq=NM_138598 | |nearest_refseq=NM_138598 | ||
|nearest_unigene=Mm.351688 | |nearest_unigene=Mm.351688 | ||
|num_trans= | |num_trans=78188 | ||
|species=mouse | |species=mouse | ||
|start=113684021 | |start=113684021 | ||
Latest revision as of 19:37, 28 July 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -102 |
|---|---|
| Nearest PromoterID: | NM_001362751 |
| Entrez ID: | 28081 |
| Nearest Unigene: | Mm.351688 |
| Nearest Refseq: | NM_138598 |
| Nearest Ensembl: | ENSMUSG00000041629 |
| Gene Name: | RIKEN cDNA 4930539H15 gene |
| Gene Alias: | D11Wsu99e |
| Gene Description: | family with sequence similarity 104, member A |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.751244 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.