TSS: Hg 100530.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|DCTN22= | |||
|all_trans=HGNC:2713 | |||
|chr=chr9 | |||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance_to_tss= | |distance=0 | ||
|distance_to_tss=4 | |||
|end=34620516 | |||
|end_of_center_position=34620491 | |||
|entrez_id=11258 | |entrez_id=11258 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
|gene_alias=DCTN-22 | |gene_alias=DCTN-22{{!}}DCTN22 | ||
|gene_description=dynactin subunit 3 | |gene_description=dynactin subunit 3 | ||
|gene_name=DCTN3 | |gene_id=11258 | ||
|gene_name=dynactin subunit 3 | |||
|gene_source=HGNC:2713 | |||
|gene_symbol=DCTN3 | |||
|gene_synonyms=DCTN-22 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:2713 | |||
|nearest_ensembl=ENSG00000137100 | |nearest_ensembl=ENSG00000137100 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_007234 | ||
|nearest_refseq=NM_007234 | |nearest_refseq=NM_007234 | ||
|nearest_unigene=Hs.511768 | |nearest_unigene=Hs.511768 | ||
|tata_box= | |num_trans=11258 | ||
|species=human | |||
|start=34620465 | |||
|start_of_center_position=34620490 | |||
|strand=- | |||
|tata_box=-76(CTGCATAAAGGG,-,0.00) | |||
|transcript_name=ENST00000259632.12 ENST00000341694.6 ENST00000477738.6 ENST00000378913.6 BC000319 BC003004 AF082513 BC107697 AK314730 | |||
|tss_classification=yes | |||
|tss_id=hg_100530.1 | |tss_id=hg_100530.1 | ||
|tss_score=1 | |||
|uniprot_id=O75935 X6RA56 X6RLR1 | |||
}} | }} | ||
Latest revision as of 17:45, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 4 |
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| Nearest PromoterID: | NM_007234 |
| Entrez ID: | 11258 |
| Nearest Unigene: | Hs.511768 |
| Nearest Refseq: | NM_007234 |
| Nearest Ensembl: | ENSG00000137100 |
| Gene Name: | dynactin subunit 3 |
| Gene Alias: | DCTN-22|DCTN22 |
| Gene Description: | dynactin subunit 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -76(CTGCATAAAGGG,-,0.00) |
TSS expression
Expression data not found.