TSS: Hg 100531.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-2468 |entrez_id=138715 |gc_percent=0.542289 |gene_alias=- |gene_description=AT-rich interaction domain 3C |gene_name=ARID3C |g...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=NA | |||
|distance_to_tss=-2468 | |distance_to_tss=-2468 | ||
|end=34630486 | |||
|end_of_center_position=34630483 | |||
|entrez_id=138715 | |entrez_id=138715 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_001017363 | |nearest_refseq=NM_001017363 | ||
|nearest_unigene=Hs.534549 | |nearest_unigene=Hs.534549 | ||
|num_trans=0 | |||
|species=human | |||
|start=34630478 | |||
|start_of_center_position=34630482 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100531.1 | |tss_id=hg_100531.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 15:22, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -2468 |
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| Nearest PromoterID: | NM_001017363 |
| Entrez ID: | 138715 |
| Nearest Unigene: | Hs.534549 |
| Nearest Refseq: | NM_001017363 |
| Nearest Ensembl: | ENSG00000205143 |
| Gene Name: | ARID3C |
| Gene Alias: | - |
| Gene Description: | AT-rich interaction domain 3C |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |