TSS: Hg 100537.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|DSMA2= | |||
|OPRS1= | |||
|SIG-1R= | |||
|SR-BP= | |||
|SR-BP1= | |||
|SRBP= | |||
|chr=chr9 | |||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=1933 | |||
|end=34635859 | |||
|end_of_center_position=34635854 | |||
|entrez_id=10280 | |entrez_id=10280 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
|gene_alias=ALS16 | |gene_alias=ALS16{{!}}DSMA2{{!}}OPRS1{{!}}SIG-1R{{!}}SR-BP{{!}}SR-BP1{{!}}SRBP{{!}}hSigmaR1{{!}}sigma1R | ||
|gene_description=sigma non-opioid intracellular receptor 1 | |gene_description=sigma non-opioid intracellular receptor 1 | ||
|gene_name=SIGMAR1 | |gene_name=SIGMAR1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hSigmaR1= | |||
|nearest_ensembl=ENSG00000147955 | |nearest_ensembl=ENSG00000147955 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001282205 | ||
|nearest_refseq=NM_005866 | |nearest_refseq=NM_005866 | ||
|nearest_unigene=Hs.522087 | |nearest_unigene=Hs.522087 | ||
|num_trans=0 | |||
|sigma1R= | |||
|species=human | |||
|start=34635848 | |||
|start_of_center_position=34635853 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100537.1 | |tss_id=hg_100537.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:19, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 1933 |
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Nearest PromoterID: | NM_001282205 |
Entrez ID: | 10280 |
Nearest Unigene: | Hs.522087 |
Nearest Refseq: | NM_005866 |
Nearest Ensembl: | ENSG00000147955 |
Gene Name: | SIGMAR1 |
Gene Alias: | ALS16|DSMA2|OPRS1|SIG-1R|SR-BP|SR-BP1|SRBP|hSigmaR1|sigma1R |
Gene Description: | sigma non-opioid intracellular receptor 1 |
Gene Type: | protein-coding |
CpG%: | 0.025 |
GC%: | 0.636816 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |