TSS: Mm 161110.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=MGI:1921319 | ||
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description= | |gene_description=serine (or cysteine) peptidase inhibitor, clade A, member 3A | ||
|gene_id=74069 | |gene_id=74069 | ||
|gene_name= | |gene_name=serine (or cysteine) peptidase inhibitor, clade A, member 3A | ||
|gene_source=MGI:1921319 | |gene_source=MGI:1921319 | ||
|gene_symbol=Serpina3a | |gene_symbol=Serpina3a | ||
|gene_synonyms= | |gene_synonyms=4933406L18Rik alpha-1_antiproteinase, antitrypsin | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1921319 | |hgnc_mgi_id=MGI:1921319 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_028740 | |nearest_refseq=NM_028740 | ||
|nearest_unigene=Mm.159128 | |nearest_unigene=Mm.159128 | ||
|num_trans= | |num_trans=74069 | ||
|species=mouse | |species=mouse | ||
|start=104112723 | |start=104112723 | ||
|start_of_center_position=104112723 | |start_of_center_position=104112723 | ||
|strand=+ | |strand=+ | ||
|tata_box= | |tata_box=-34(TGCTTTATAAAG,-,0.00),-32(CTTTATAAAGAA,+,0.00) | ||
|transcript_name=ENSMUST00000109965.7 | |transcript_name=ENSMUST00000109965.7 BC063325 AK016702 | ||
|tss_classification=no | |tss_classification=no | ||
|tss_id=mm_161110.1 | |tss_id=mm_161110.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=H7BWY0 Q6P4P1 | |uniprot_id=H7BWY0 Q6P4P1 | ||
}} | }} | ||
Latest revision as of 08:54, 27 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 0 |
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| Nearest PromoterID: | NM_028740 |
| Entrez ID: | 74069 |
| Nearest Unigene: | Mm.159128 |
| Nearest Refseq: | NM_028740 |
| Nearest Ensembl: | ENSMUSG00000041536 |
| Gene Name: | serine (or cysteine) peptidase inhibitor, clade A, member 3A |
| Gene Alias: | - |
| Gene Description: | serine (or cysteine) peptidase inhibitor, clade A, member 3A |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(TGCTTTATAAAG,-,0.00),-32(CTTTATAAAGAA,+,0.00) |
TSS expression
Expression data not found.