TSS: Hg 100550.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=40880 |entrez_id=389715 |gc_percent=0.567164 |gene_alias=C9orf144|FAM205B |gene_description=transmembrane protein C9orf144B pse...") |
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{{TSSDetail | {{TSSDetail | ||
|C9orf144A= | |||
|FAM205B= | |||
|chr=chr9 | |||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=NA | |||
|distance_to_tss=40880 | |distance_to_tss=40880 | ||
|end=34797708 | |||
|end_of_center_position=34797707 | |||
|entrez_id=389715 | |entrez_id=389715 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
|gene_alias=C9orf144 | |gene_alias=C9orf144{{!}}C9orf144A{{!}}FAM205B | ||
|gene_description=transmembrane protein C9orf144B pseudogene | |gene_description=transmembrane protein C9orf144B pseudogene | ||
|gene_name=FAM205BP | |gene_name=FAM205BP | ||
Line 12: | Line 18: | ||
|nearest_refseq=NM_001126494 | |nearest_refseq=NM_001126494 | ||
|nearest_unigene=Hs.713965 | |nearest_unigene=Hs.713965 | ||
|num_trans=0 | |||
|species=human | |||
|start=34797704 | |||
|start_of_center_position=34797706 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100550.1 | |tss_id=hg_100550.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:20, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 40880 |
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Nearest PromoterID: | NR_024481 |
Entrez ID: | 389715 |
Nearest Unigene: | Hs.713965 |
Nearest Refseq: | NM_001126494 |
Nearest Ensembl: | |
Gene Name: | FAM205BP |
Gene Alias: | C9orf144|C9orf144A|FAM205B |
Gene Description: | transmembrane protein C9orf144B pseudogene |
Gene Type: | pseudo |
CpG%: | 0.035 |
GC%: | 0.567164 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |