TSS: Mm 161205.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
| (One intermediate revision by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=MGI:2137361 | ||
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.562189 | |gc_percent=0.562189 | ||
|gene_alias=Cnt3 | |gene_alias=Cnt3 | ||
|gene_description= | |gene_description=solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 | ||
|gene_id=114304 | |gene_id=114304 | ||
|gene_name= | |gene_name=solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 | ||
|gene_source=MGI:2137361 | |gene_source=MGI:2137361 | ||
|gene_symbol=Slc28a3 | |gene_symbol=Slc28a3 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_022317 | |nearest_refseq=NM_022317 | ||
|nearest_unigene=Mm.18188 | |nearest_unigene=Mm.18188 | ||
|num_trans= | |num_trans=114304 | ||
|species=mouse | |species=mouse | ||
|start=58610875 | |start=58610875 | ||
|start_of_center_position=58610875 | |start_of_center_position=58610875 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-35(TCATTTAAAAGG,-,0.00) | ||
|transcript_name=ENSMUST00000022036.13 | |transcript_name=ENSMUST00000022036.13 ENSMUST00000224906.1 ENSMUST00000148396.1 AK085680 AK145077 AK052784 AK164752 AK164740 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_161205.1 | |tss_id=mm_161205.1 | ||
Latest revision as of 08:56, 27 July 2021
Basic information about the TSS
|
| |||||||||||||
| TSS cluster detected* |
|---|
* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_022317 |
| Entrez ID: | 114304 |
| Nearest Unigene: | Mm.18188 |
| Nearest Refseq: | NM_022317 |
| Nearest Ensembl: | ENSMUSG00000021553 |
| Gene Name: | solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 |
| Gene Alias: | Cnt3 |
| Gene Description: | solute carrier family 28 (sodium-coupled nucleoside transporter), member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.562189 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -35(TCATTTAAAAGG,-,0.00) |
TSS expression
Expression data not found.