TSS: Mm 114401.1: Difference between revisions
From referenceTSS
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|Rad26l= | |Rad26l= | ||
|Sr278= | |Sr278= | ||
|all_trans= | |all_trans=MGI:1923501 | ||
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance=0 | |distance=0 | ||
|distance_to_tss= | |distance_to_tss=95 | ||
|end=63815379 | |end=63815379 | ||
|end_of_center_position=63815335 | |end_of_center_position=63815335 | ||
|entrez_id=76251 | |entrez_id=76251 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
|gene_alias=0610007P08Rik | |gene_alias=0610007P08Rik{{!}}1700019D06Rik{{!}}9330134C04Rik{{!}}Rad26l{{!}}Sr278 | ||
|gene_description= | |gene_description=excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 | ||
|gene_id=76251 | |gene_id=76251 | ||
|gene_name= | |gene_name=excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 | ||
|gene_source=MGI:1923501 | |gene_source=MGI:1923501 | ||
|gene_symbol=Ercc6l2 | |gene_symbol=Ercc6l2 | ||
| Line 23: | Line 23: | ||
|hgnc_mgi_id=MGI:1923501 | |hgnc_mgi_id=MGI:1923501 | ||
|nearest_ensembl=ENSMUSG00000021470 | |nearest_ensembl=ENSMUSG00000021470 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001361124 | ||
|nearest_refseq=NM_023507 | |nearest_refseq=NM_023507 | ||
|nearest_unigene=Mm.186610 | |nearest_unigene=Mm.186610 | ||
|num_trans= | |num_trans=76251 | ||
|species=mouse | |species=mouse | ||
|start=63815290 | |start=63815290 | ||
|start_of_center_position=63815334 | |start_of_center_position=63815334 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000095724. | |transcript_name=ENSMUST00000095724.10 ENSMUST00000067821.12 ENSMUST00000144763.1 ENSMUST00000159957.8 AK049874 AK002307 AK035054 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_114401.1 | |tss_id=mm_114401.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id=E9QPI9 F6TW36 Q9JIM3 | ||
}} | }} | ||
Latest revision as of 15:45, 26 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 95 |
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| Nearest PromoterID: | NM_001361124 |
| Entrez ID: | 76251 |
| Nearest Unigene: | Mm.186610 |
| Nearest Refseq: | NM_023507 |
| Nearest Ensembl: | ENSMUSG00000021470 |
| Gene Name: | excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 |
| Gene Alias: | 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278 |
| Gene Description: | excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.