TSS: Hg 100567.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=HGNC:23215 | |||
|chr=chr9 | |||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=0 | |||
|distance_to_tss=2 | |distance_to_tss=2 | ||
|end=35096640 | |||
|end_of_center_position=35096599 | |||
|entrez_id=84720 | |entrez_id=84720 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
|gene_alias=HPMRS2 | |gene_alias=HPMRS2 | ||
|gene_description=phosphatidylinositol glycan anchor biosynthesis class O | |gene_description=phosphatidylinositol glycan anchor biosynthesis class O | ||
|gene_name=PIGO | |gene_id=84720 | ||
|gene_name=phosphatidylinositol glycan anchor biosynthesis class O | |||
|gene_source=HGNC:23215 | |||
|gene_symbol=PIGO | |||
|gene_synonyms=DKFZp434M222 FLJ00135 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:23215 | |||
|nearest_ensembl=ENSG00000165282 | |nearest_ensembl=ENSG00000165282 | ||
|nearest_promoter_id=NM_152850 | |nearest_promoter_id=NM_152850 | ||
|nearest_refseq=NM_032634 | |nearest_refseq=NM_032634 | ||
|nearest_unigene=Hs.522099 | |nearest_unigene=Hs.522099 | ||
|num_trans=84720 | |||
|species=human | |||
|start=35096557 | |||
|start_of_center_position=35096598 | |||
|strand=- | |||
|transcript_name=ENST00000378617.4 ENST00000361778.6 ENST00000465745.6 ENST00000492770.1 AK074064 | |||
|tss_classification=yes | |||
|tss_id=hg_100567.1 | |tss_id=hg_100567.1 | ||
|tss_score=1 | |||
|uniprot_id=Q8TEQ8 | |||
}} | }} | ||
Latest revision as of 17:46, 19 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2 |
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| Nearest PromoterID: | NM_152850 |
| Entrez ID: | 84720 |
| Nearest Unigene: | Hs.522099 |
| Nearest Refseq: | NM_032634 |
| Nearest Ensembl: | ENSG00000165282 |
| Gene Name: | phosphatidylinositol glycan anchor biosynthesis class O |
| Gene Alias: | HPMRS2 |
| Gene Description: | phosphatidylinositol glycan anchor biosynthesis class O |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.