TSS: Hg 228775.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=HGNC:52829 | ||
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
|distance=- | |distance=-20 | ||
|distance_to_tss=-116035 | |distance_to_tss=-116035 | ||
|end=64445316 | |end=64445316 | ||
| Line 11: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=ADAMTS9 antisense RNA 1 | |gene_description=ADAMTS9 antisense RNA 1 | ||
|gene_name= | |gene_id=101929316 | ||
|gene_name=PRICKLE2 divergent transcript | |||
|gene_source=HGNC:52829 | |||
|gene_symbol=PRICKLE2-DT | |||
|gene_synonyms= | |||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:52829 | |||
|nearest_ensembl=ENSG00000241158 | |nearest_ensembl=ENSG00000241158 | ||
|nearest_promoter_id= | |nearest_promoter_id=NR_110150 | ||
|nearest_refseq=NR_110150 | |nearest_refseq=NR_110150 | ||
|nearest_unigene=Hs.476604 | |nearest_unigene=Hs.476604 | ||
|num_trans= | |num_trans=101929316 | ||
|species=human | |species=human | ||
|start=64445306 | |start=64445306 | ||
|start_of_center_position=64445311 | |start_of_center_position=64445311 | ||
|strand=+ | |strand=+ | ||
|transcript_name= | |transcript_name=ENST00000659263.1 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_228775.1 | |tss_id=hg_228775.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |||
}} | }} | ||
Latest revision as of 09:53, 21 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -116035 |
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| Nearest PromoterID: | NR_110150 |
| Entrez ID: | 101929335 |
| Nearest Unigene: | Hs.476604 |
| Nearest Refseq: | NR_110150 |
| Nearest Ensembl: | ENSG00000241158 |
| Gene Name: | PRICKLE2 divergent transcript |
| Gene Alias: | - |
| Gene Description: | ADAMTS9 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.145 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.