TSS: Hg 10059.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=1862 |entrez_id=9903 |gc_percent=0.577114 |gene_alias=- |gene_description=kelch like family member 21 |gene_name=KLHL21 |gene_t...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr1 | |||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance_to_tss= | |distance=NA | ||
|distance_to_tss=1833 | |||
|end=6601039 | |||
|end_of_center_position=6601037 | |||
|entrez_id=9903 | |entrez_id=9903 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_014851 | |nearest_refseq=NM_014851 | ||
|nearest_unigene=Hs.7764 | |nearest_unigene=Hs.7764 | ||
|tata_box= | |num_trans=0 | ||
|species=human | |||
|start=6601033 | |||
|start_of_center_position=6601036 | |||
|strand=- | |||
|tata_box=-34(TGCTATATAAGG,-,0.00) | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_10059.1 | |tss_id=hg_10059.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 15:23, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1833 |
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| Nearest PromoterID: | NM_001324309 |
| Entrez ID: | 9903 |
| Nearest Unigene: | Hs.7764 |
| Nearest Refseq: | NM_014851 |
| Nearest Ensembl: | ENSG00000162413 |
| Gene Name: | KLHL21 |
| Gene Alias: | - |
| Gene Description: | kelch like family member 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(TGCTATATAAGG,-,0.00) |