TSS: Hg 10063.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=-539 |entrez_id=148479 |gc_percent=0.761194 |gene_alias=PHF5|SPOC1 |gene_description=PHD finger protein 13 |gene_name=PHF13 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
|SPOC1= | |||
|chr=chr1 | |||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-574 | |||
|end=6613176 | |||
|end_of_center_position=6613158 | |||
|entrez_id=148479 | |entrez_id=148479 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
|gene_alias=PHF5 | |gene_alias=PHF5{{!}}SPOC1 | ||
|gene_description=PHD finger protein 13 | |gene_description=PHD finger protein 13 | ||
|gene_name=PHF13 | |gene_name=PHF13 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_153812 | |nearest_refseq=NM_153812 | ||
|nearest_unigene=Hs.516079 | |nearest_unigene=Hs.516079 | ||
|num_trans=0 | |||
|species=human | |||
|start=6613138 | |||
|start_of_center_position=6613157 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_10063.1 | |tss_id=hg_10063.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 16:21, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -574 |
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| Nearest PromoterID: | NM_153812 |
| Entrez ID: | 148479 |
| Nearest Unigene: | Hs.516079 |
| Nearest Refseq: | NM_153812 |
| Nearest Ensembl: | ENSG00000116273 |
| Gene Name: | PHF13 |
| Gene Alias: | PHF5|SPOC1 |
| Gene Description: | PHD finger protein 13 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |