TSS: Mm 161571.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|LZK=
|LZK=
|all_trans=ENSMUST00000042065.6:-15 NM_172821:-15 uc007yrr.2:-15 DQ480427:-15
|all_trans=MGI:2444243
|chr=chr16
|chr=chr16
|cpg_percent=0.005
|cpg_percent=0.005
Line 10: Line 10:
|entrez_id=71751
|entrez_id=71751
|gc_percent=0.532338
|gc_percent=0.532338
|gene_alias=C130026N12Rik
|gene_alias=C130026N12Rik{{!}}LZK
|gene_description=mitogen-activated protein kinase kinase kinase 13
|gene_description=mitogen-activated protein kinase kinase kinase 13
|gene_id=71751
|gene_id=71751
Line 23: Line 23:
|nearest_refseq=NM_172821
|nearest_refseq=NM_172821
|nearest_unigene=Mm.420837
|nearest_unigene=Mm.420837
|num_trans=4
|num_trans=71751
|species=mouse
|species=mouse
|start=21891983
|start=21891983
|start_of_center_position=21891983
|start_of_center_position=21891983
|strand=+
|strand=+
|transcript_name=ENSMUST00000042065.6 NM_172821 uc007yrr.2 DQ480427
|transcript_name=ENSMUST00000042065.6 DQ480427
|tss_classification=no
|tss_classification=no
|tss_id=mm_161571.1
|tss_id=mm_161571.1

Latest revision as of 09:04, 27 July 2021

Basic information about the TSS


TSS ID:mm_161571.1
Species:mouse
Chr:chr16
Start:21891983
End:21891984
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:ENSMUST00000042065.6 DQ480427
Distance:-15
GeneID:71751
HGNC/MGI_ID:MGI:2444243
UniProt_ID:Q1HKZ5
Gene_name:mitogen-activated protein kinase kinase kinase 13
Gene_symbol:Map3k13
Gene_synonyms:C130026N12Rik
Gene_source:MGI:2444243



TATA-Box annotation


Distance to TSS:15
Nearest PromoterID:NM_172821
Entrez ID:71751
Nearest Unigene:Mm.420837
Nearest Refseq:NM_172821
Nearest Ensembl:ENSMUSG00000033618
Gene Name:mitogen-activated protein kinase kinase kinase 13
Gene Alias:C130026N12Rik|LZK
Gene Description:mitogen-activated protein kinase kinase kinase 13
Gene Type:protein-coding
CpG%:0.005
GC%:0.532338
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.