TSS: Hg 100641.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=-4343 |entrez_id=10488 |gc_percent=0.502488 |gene_alias=LUMAN|LZIP|sLZIP |gene_description=cAMP responsive element binding prot...") |
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{{TSSDetail | {{TSSDetail | ||
|LZIP= | |||
|TLN= | |||
|all_trans=LF354351:322 MA589928:322 | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance_to_tss= | |distance=322 | ||
|entrez_id= | |distance_to_tss=4218 | ||
|end=35727984 | |||
|end_of_center_position=35727978 | |||
|entrez_id=7094 | |||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
|gene_alias= | |gene_alias=ILWEQ{{!}}TLN{{!}}talin-1 | ||
|gene_description= | |gene_description=talin 1 | ||
|gene_name= | |gene_name=TLN1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl= | |nearest_ensembl=ENSG00000137076 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_006289 | ||
|nearest_refseq= | |nearest_refseq=NM_006289 | ||
|nearest_unigene=Hs. | |nearest_unigene=Hs.471014 | ||
|num_trans=2 | |||
|sLZIP= | |||
|species=human | |||
|start=35727970 | |||
|start_of_center_position=35727977 | |||
|strand=- | |||
|talin-1= | |||
|transcript_name=LF354351 MA589928 | |||
|tss_classification=no | |||
|tss_id=hg_100641.1 | |tss_id=hg_100641.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:22, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 4218 |
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Nearest PromoterID: | NM_006289 |
Entrez ID: | 7094 |
Nearest Unigene: | Hs.471014 |
Nearest Refseq: | NM_006289 |
Nearest Ensembl: | ENSG00000137076 |
Gene Name: | TLN1 |
Gene Alias: | ILWEQ|TLN|talin-1 |
Gene Description: | talin 1 |
Gene Type: | protein-coding |
CpG%: | 0.015 |
GC%: | 0.502488 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |