TSS: Mm 80989.1: Difference between revisions

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Line 3: Line 3:
|AI256758=
|AI256758=
|D430026L04Rik=
|D430026L04Rik=
|all_trans=ENSMUST00000035164.9:0 ENSMUST00000189631.1:0 AK085031:0 AK129104:0 AK084654:0 AK084869:0 NM_176979:72 uc009rgl.1:72 BC049797:72 ENSMUST00000187065.1:248
|all_trans=MGI:1920018
|chr=chr9
|chr=chr9
|cpg_percent=0.135
|cpg_percent=0.135
Line 12: Line 12:
|entrez_id=235559
|entrez_id=235559
|gc_percent=0.731343
|gc_percent=0.731343
|gene_alias=1110031N14Rik
|gene_alias=1110031N14Rik{{!}}2810429C13Rik{{!}}AI256758{{!}}D430026L04Rik{{!}}mKIAA0259
|gene_description=topoisomerase (DNA) II binding protein 1
|gene_description=topoisomerase (DNA) II binding protein 1
|gene_id=235559
|gene_id=235559
Line 26: Line 26:
|nearest_refseq=NM_176979
|nearest_refseq=NM_176979
|nearest_unigene=Mm.259893
|nearest_unigene=Mm.259893
|num_trans=10
|num_trans=235559
|species=mouse
|species=mouse
|start=103305156
|start=103305156

Latest revision as of 12:41, 28 July 2021

Basic information about the TSS


TSS ID:mm_80989.1
Species:mouse
Chr:chr9
Start:103305156
End:103305255
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 5)



Gene and protein annotation


Transcript_name:ENSMUST00000035164.9 ENSMUST00000189631.1 AK085031 AK129104 AK084654 AK084869
Distance:0
GeneID:235559
HGNC/MGI_ID:MGI:1920018
UniProt_ID:Q6ZQF0
Gene_name:topoisomerase (DNA) II binding protein 1
Gene_symbol:Topbp1
Gene_synonyms:1110031N14Rik 2810429C13Rik D430026L04Rik
Gene_source:MGI:1920018



TATA-Box annotation


Distance to TSS:-121
Nearest PromoterID:NM_176979
Entrez ID:235559
Nearest Unigene:Mm.259893
Nearest Refseq:NM_176979
Nearest Ensembl:ENSMUSG00000032555
Gene Name:topoisomerase (DNA) II binding protein 1
Gene Alias:1110031N14Rik|2810429C13Rik|AI256758|D430026L04Rik|mKIAA0259
Gene Description:topoisomerase (DNA) II binding protein 1
Gene Type:protein-coding
CpG%:0.135
GC%:0.731343
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.