TSS: Hg 10065.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|chr=chr1 | |||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
|distance=NA | |||
|distance_to_tss=26990 | |distance_to_tss=26990 | ||
|end=6652146 | |||
|end_of_center_position=6652141 | |||
|entrez_id=90326 | |entrez_id=90326 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| Line 9: | Line 13: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000041988 | |nearest_ensembl=ENSG00000041988 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_138350 | ||
|nearest_refseq=NM_138350 | |nearest_refseq=NM_138350 | ||
|nearest_unigene=Hs.689006 | |nearest_unigene=Hs.689006 | ||
|num_trans=0 | |||
|species=human | |||
|start=6652134 | |||
|start_of_center_position=6652140 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_10065.1 | |tss_id=hg_10065.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 15:24, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 26990 |
|---|---|
| Nearest PromoterID: | NM_138350 |
| Entrez ID: | 90326 |
| Nearest Unigene: | Hs.689006 |
| Nearest Refseq: | NM_138350 |
| Nearest Ensembl: | ENSG00000041988 |
| Gene Name: | THAP3 |
| Gene Alias: | - |
| Gene Description: | THAP domain containing 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |