TSS: Hg 100656.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=1231 |entrez_id=692094 |gc_percent=0.512438 |gene_alias=PSMP |gene_description="microseminoprotein, prostate associated" |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=CU674847:169 | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance_to_tss= | |distance=169 | ||
|distance_to_tss=1230 | |||
|end=35753050 | |||
|end_of_center_position=35753046 | |||
|entrez_id=692094 | |entrez_id=692094 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
|gene_alias=PSMP | |gene_alias=PSMP | ||
|gene_description= | |gene_description=microseminoprotein, prostate associated | ||
|gene_name=MSMP | |gene_name=MSMP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_001044264 | |nearest_refseq=NM_001044264 | ||
|nearest_unigene=Hs.571601 | |nearest_unigene=Hs.571601 | ||
|num_trans=1 | |||
|species=human | |||
|start=35753041 | |||
|start_of_center_position=35753045 | |||
|strand=- | |||
|transcript_name=CU674847 | |||
|tss_classification=no | |||
|tss_id=hg_100656.1 | |tss_id=hg_100656.1 | ||
|tss_score=1 | |||
}} | }} | ||
Latest revision as of 15:25, 15 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1230 |
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| Nearest PromoterID: | NM_001044264 |
| Entrez ID: | 692094 |
| Nearest Unigene: | Hs.571601 |
| Nearest Refseq: | NM_001044264 |
| Nearest Ensembl: | ENSG00000215183 |
| Gene Name: | MSMP |
| Gene Alias: | PSMP |
| Gene Description: | microseminoprotein, prostate associated |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |