TSS: Hg 100672.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-1599 |entrez_id=158376 |gc_percent=0.59204 |gene_alias=SPAR |gene_description=long intergenic non-protein coding RNA 961 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
|SPAR= | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance_to_tss=- | |distance=NA | ||
|distance_to_tss=-1606 | |||
|end=35907906 | |||
|end_of_center_position=35907884 | |||
|entrez_id=158376 | |entrez_id=158376 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
|gene_alias=SPAR | |gene_alias=LINC00961{{!}}SPAR | ||
|gene_description= | |gene_description=small regulatory polypeptide of amino acid response | ||
|gene_name= | |gene_name=SPAAR | ||
|gene_type= | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000235387 | |nearest_ensembl=ENSG00000235387 | ||
|nearest_promoter_id= | |nearest_promoter_id=NM_001348107 | ||
|nearest_refseq= | |nearest_refseq=NM_001348107 | ||
|nearest_unigene=Hs.302677 | |nearest_unigene=Hs.302677 | ||
|num_trans=0 | |||
|species=human | |||
|start=35907861 | |||
|start_of_center_position=35907883 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100672.1 | |tss_id=hg_100672.1 | ||
|tss_score=1 | |||
}} | }} |
Latest revision as of 16:22, 15 June 2021
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | -1606 |
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Nearest PromoterID: | NM_001348107 |
Entrez ID: | 158376 |
Nearest Unigene: | Hs.302677 |
Nearest Refseq: | NM_001348107 |
Nearest Ensembl: | ENSG00000235387 |
Gene Name: | SPAAR |
Gene Alias: | LINC00961|SPAR |
Gene Description: | small regulatory polypeptide of amino acid response |
Gene Type: | protein-coding |
CpG%: | 0.01 |
GC%: | 0.59204 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |