TSS: Hg 236360.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|all_trans= | |all_trans=ENST00000484462.1:24 | ||
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance= | |distance=24 | ||
|distance_to_tss= | |distance_to_tss=32 | ||
|end=71489292 | |end=71489292 | ||
|end_of_center_position=9156915 | |end_of_center_position=9156915 | ||
| Line 11: | Line 11: | ||
|gene_alias=KOX12 | |gene_alias=KOX12 | ||
|gene_description=zinc finger protein 19 | |gene_description=zinc finger protein 19 | ||
|gene_id= | |gene_id= | ||
|gene_name= | |gene_name=ribosomal protein L21 pseudogene 119 | ||
|gene_source=HGNC: | |gene_source=HGNC:35614 | ||
|gene_symbol= | |gene_symbol=RPL21P119 | ||
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC: | |hgnc_mgi_id=HGNC:35614 | ||
|nearest_ensembl=ENSG00000157429 | |nearest_ensembl=ENSG00000157429 | ||
|nearest_promoter_id=NM_006961 | |nearest_promoter_id=NM_006961 | ||
|nearest_refseq=NM_006961 | |nearest_refseq=NM_006961 | ||
|nearest_unigene=Hs.660076 | |nearest_unigene=Hs.660076 | ||
|num_trans= | |num_trans=1 | ||
|species=human | |species=human | ||
|start=71489291 | |start=71489291 | ||
|start_of_center_position=9156914 | |start_of_center_position=9156914 | ||
|strand=- | |strand=- | ||
|transcript_name= | |transcript_name=ENST00000484462.1 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_236360.1 | |tss_id=hg_236360.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 13:54, 17 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 32 |
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| Nearest PromoterID: | NM_006961 |
| Entrez ID: | 7567 |
| Nearest Unigene: | Hs.660076 |
| Nearest Refseq: | NM_006961 |
| Nearest Ensembl: | ENSG00000157429 |
| Gene Name: | ribosomal protein L21 pseudogene 119 |
| Gene Alias: | KOX12 |
| Gene Description: | zinc finger protein 19 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.