TSS: Mm 146299.1: Difference between revisions
From referenceTSS
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|U5-15kD= | |U5-15kD= | ||
|U5-15kDa= | |U5-15kDa= | ||
|all_trans=ENSMUST00000145963. | |all_trans=ENSMUST00000145963.8:0 ENSMUST00000125127.7:0 ENSMUST00000145116.7:0 ENSMUST00000126177.7:0 ENSMUST00000025464.7:0 ENSMUST00000025463.13:0 NM_001384176:0 NM_178604:0 NM_001384173:0 NM_001038608:0 NM_001384178:0 NM_001042408:0 NR_168915:0 NR_168913:0 NR_168914:0 NM_025299:0 NM_001384174:0 NM_001384177:0 NM_001384175:0 AK010599:0 AK148287:0 AK166497:0 BC029327:0 AK007331:0 AK004039:0 BC025053:0 AK171121:0 BC031634:0 BC014770:0 BC003876:0 ENSMUST00000156400.8:-11 ENSMUST00000126360.1:13 ENSMUST00000127234.7:14 AK011717:14 ENSMUST00000155879.1:32 ENSMUST00000125352.1:37 ENSMUST00000153363.2:379 AK183568:379 AK185350:379 AK187706:379 AK187751:379 AK189069:379 AK198184:379 AK218707:379 AK181260:379 AK189366:382 AK184254:382 | ||
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
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|entrez_id=27366 | |entrez_id=27366 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
|gene_alias=D18Wsu98e | |gene_alias=D18Wsu98e{{!}}Dim1{{!}}Gm16286{{!}}Txnl4{{!}}U5-15kD{{!}}U5-15kDa | ||
|gene_description=thioredoxin-like 4A | |gene_description=thioredoxin-like 4A | ||
|gene_id=27366 | |gene_id=117903916 27366 | ||
|gene_name= | |gene_name=N(alpha)-acetyltransferase 12, NatA catalytic subunit; thioredoxin-like 4A | ||
|gene_source=MGI:1351613 MGI:3833940 | |gene_source=MGI:1351613 MGI:3833940 | ||
|gene_symbol= | |gene_symbol=Naa12 Txnl4a | ||
|gene_synonyms=D18Wsu98e ENSMUSG00000057130 Txnl4 U5-15kDa | |gene_synonyms=D18Wsu98e ENSMUSG00000057130 Gm16286 Txnl4 U5-15kDa | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1351613 MGI:3833940 | |hgnc_mgi_id=MGI:1351613 MGI:3833940 | ||
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|nearest_refseq=NM_025299 | |nearest_refseq=NM_025299 | ||
|nearest_unigene=Mm.172411 | |nearest_unigene=Mm.172411 | ||
|num_trans= | |num_trans=47 | ||
|species=mouse | |species=mouse | ||
|start=80206775 | |start=80206775 | ||
|start_of_center_position=80206828 | |start_of_center_position=80206828 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000145963. | |transcript_name=ENSMUST00000145963.8 ENSMUST00000125127.7 ENSMUST00000145116.7 ENSMUST00000126177.7 ENSMUST00000025464.7 ENSMUST00000025463.13 NM_001384176 NM_178604 NM_001384173 NM_001038608 NM_001384178 NM_001042408 NR_168915 NR_168913 NR_168914 NM_025299 NM_001384174 NM_001384177 NM_001384175 AK010599 AK148287 AK166497 BC029327 AK007331 AK004039 BC025053 AK171121 BC031634 BC014770 BC003876 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_146299.1 | |tss_id=mm_146299.1 | ||
Revision as of 10:10, 20 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -18 |
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| Nearest PromoterID: | NM_178604 |
| Entrez ID: | 27366 |
| Nearest Unigene: | Mm.172411 |
| Nearest Refseq: | NM_025299 |
| Nearest Ensembl: | ENSMUSG00000057130 |
| Gene Name: | N(alpha)-acetyltransferase 12, NatA catalytic subunit; thioredoxin-like 4A |
| Gene Alias: | D18Wsu98e|Dim1|Gm16286|Txnl4|U5-15kD|U5-15kDa |
| Gene Description: | thioredoxin-like 4A |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.