TSS: Mm 170516.1: Difference between revisions
From referenceTSS
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|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance= | |distance=NA | ||
|distance_to_tss=53840 | |distance_to_tss=53840 | ||
|end=29464762 | |end=29464762 | ||
| Line 12: | Line 12: | ||
|entrez_id=58205 | |entrez_id=58205 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
|gene_alias=B7-DC | |gene_alias=B7-DC{{!}}Btdc{{!}}F730015O22Rik{{!}}PD-L2 | ||
|gene_description=programmed cell death 1 ligand 2 | |gene_description=programmed cell death 1 ligand 2 | ||
|gene_id= | |gene_id= | ||
| Line 33: | Line 33: | ||
|start_of_center_position=29464759 | |start_of_center_position=29464759 | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box=-38(CCCCTTATAAGC,-,0.00),-36(CCTTATAAGCAC,+,0.00) | ||
|transcript_name= | |transcript_name= | ||
|tss_classification=no | |tss_classification=no | ||
Latest revision as of 19:27, 20 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 53840 |
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| Nearest PromoterID: | NM_021396 |
| Entrez ID: | 58205 |
| Nearest Unigene: | Mm.116737 |
| Nearest Refseq: | NM_021396 |
| Nearest Ensembl: | ENSMUSG00000016498 |
| Gene Name: | Pdcd1lg2 |
| Gene Alias: | B7-DC|Btdc|F730015O22Rik|PD-L2 |
| Gene Description: | programmed cell death 1 ligand 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -38(CCCCTTATAAGC,-,0.00),-36(CCTTATAAGCAC,+,0.00) |