TSS: Mm 16915.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|Rnmt2= | |Rnmt2= | ||
|all_trans=ENSMUST00000124488.6:0 ENSMUST00000144957.2:0 NM_010067 | |all_trans=ENSMUST00000124488.6:0 ENSMUST00000144957.2:0 NM_010067:0 AK029136:0 AK050403:0 BC087892:0 AF012129:1 ENSMUST00000028055.10:2 AF045889:5 | ||
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 10: | Line 10: | ||
|entrez_id=13434 | |entrez_id=13434 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
|gene_alias=Dnmt2 | |gene_alias=Dnmt2{{!}}Rnmt2 | ||
|gene_description=tRNA aspartic acid methyltransferase 1 | |gene_description=tRNA aspartic acid methyltransferase 1 | ||
|gene_id=13434 | |gene_id=13434 | ||
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|nearest_refseq=NM_010067 | |nearest_refseq=NM_010067 | ||
|nearest_unigene=Mm.6979 | |nearest_unigene=Mm.6979 | ||
|num_trans= | |num_trans=9 | ||
|species=mouse | |species=mouse | ||
|start=13544651 | |start=13544651 | ||
|start_of_center_position=13544662 | |start_of_center_position=13544662 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000124488.6 ENSMUST00000144957.2 NM_010067 | |transcript_name=ENSMUST00000124488.6 ENSMUST00000144957.2 NM_010067 AK029136 AK050403 BC087892 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_16915.1 | |tss_id=mm_16915.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id=A0A0A6YWY7 | |uniprot_id=A0A0A6YWY7 Q5I0V6 Q8C7F0 Q8CE27 | ||
}} | }} | ||
Revision as of 18:56, 20 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2 |
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| Nearest PromoterID: | NM_010067 |
| Entrez ID: | 13434 |
| Nearest Unigene: | Mm.6979 |
| Nearest Refseq: | NM_010067 |
| Nearest Ensembl: | ENSMUSG00000026723 |
| Gene Name: | tRNA aspartic acid methyltransferase 1 |
| Gene Alias: | Dnmt2|Rnmt2 |
| Gene Description: | tRNA aspartic acid methyltransferase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.