TSS: Hg 171540.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |chr=chr18 |cpg_percent=0.025 |distance= |distance_to_tss=-122931 |end=30175984 |entrez_id=100302131 |gc_percent=0.527363 |gene_alias=MIRN302F|hsa-mir-302f |gene_d...") |
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|distance_to_tss=-122931 | |distance_to_tss=-122931 | ||
|end=30175984 | |end=30175984 | ||
|end_of_center_position=30175980 | |||
|entrez_id=100302131 | |entrez_id=100302131 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
|gene_alias=MIRN302F | |gene_alias=MIRN302F | ||
|gene_description=microRNA 302f | |gene_description=microRNA 302f | ||
|gene_name=MIR302F | |gene_name=MIR302F | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hsa-mir-302f= | |||
|nearest_ensembl=ENSG00000283218 | |nearest_ensembl=ENSG00000283218 | ||
|nearest_promoter_id=NR_031684 | |nearest_promoter_id=NR_031684 | ||
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|species=human | |species=human | ||
|start=30175974 | |start=30175974 | ||
|start_of_center_position=30175979 | |||
|strand=- | |strand=- | ||
|tata_box="-100(CTCTTTAAAAGA,-,0.00),-99(TCTTTAAAAGAT,+,0.00),68(GCCTATAAAAAT,-,0.00)" | |tata_box="-100(CTCTTTAAAAGA,-,0.00),-99(TCTTTAAAAGAT,+,0.00),68(GCCTATAAAAAT,-,0.00)" | ||
Revision as of 10:05, 15 May 2019
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -122931 |
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| Nearest PromoterID: | NR_031684 |
| Entrez ID: | 100302131 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_031684 |
| Nearest Ensembl: | ENSG00000283218 |
| Gene Name: | MIR302F |
| Gene Alias: | MIRN302F |
| Gene Description: | microRNA 302f |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-100(CTCTTTAAAAGA,-,0.00),-99(TCTTTAAAAGAT,+,0.00),68(GCCTATAAAAAT,-,0.00)" |