TSS: Hg 84131.1: Difference between revisions

Revision as of 16:08, 18 June 2021

Basic information about the TSS

TSS ID:	hg_84131.1
Species:	human
Chr:	chr7

Start:	53811930
End:	53811942
Strand:	-

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 16)

Gene and protein annotation

Transcript_name:	ENST00000380970.2 ENST00000660945.1 ENST00000662931.1 ENST00000661502.1 ENST00000670945.1 ENST00000666213.1 ENST00000660413.1 ENST00000652440.1 ENST00000665927.1 ENST00000659794.1 ENST00000659250.1 ENST00000662259.1 ENST00000659481.1 ENST00000670507.1 ENST00000669638.1 ENST00000650830.1 ENST00000656718.1 ENST00000652104.1 ENST00000663872.1 ENST00000656885.1 ENST00000651858.1 ENST00000651506.1 ENST00000658338.1 ENST00000651951.1 NR_038371 AK127870
Distance:	0
GeneID:	401337
HGNC/MGI_ID:	HGNC:50773
UniProt_ID:	Q6ZRY6

Gene_name:	long intergenic non-protein coding RNA 1446
Gene_symbol:	LINC01446
Gene_synonyms:	FLJ45974
Gene_source:	HGNC:50773

TATA-Box annotation

Distance to TSS:	-5
Nearest PromoterID:	NR_038371
Entrez ID:	401337
Nearest Unigene:	Hs.531378
Nearest Refseq:	NM_001001707
Nearest Ensembl:	ENSG00000205628
Gene Name:	long intergenic non-protein coding RNA 1446
Gene Alias:	GS1-179L18.1
Gene Description:	long intergenic non-protein coding RNA 1446
Gene Type:	ncRNA
CpG%:	0.045
GC%:	0.616915
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
-|all_trans=ENST00000380970.2:0 NR_038371:0 uc022adj.1:0 AK127870:0
+|all_trans=ENST00000380970.2:0 ENST00000660945.1:0 ENST00000662931.1:0 ENST00000661502.1:0 ENST00000670945.1:0 ENST00000666213.1:0 ENST00000660413.1:0 ENST00000652440.1:0 ENST00000665927.1:0 ENST00000659794.1:0 ENST00000659250.1:0 ENST00000662259.1:0 ENST00000659481.1:0 ENST00000670507.1:0 ENST00000669638.1:0 ENST00000650830.1:0 ENST00000656718.1:0 ENST00000652104.1:0 ENST00000663872.1:0 ENST00000656885.1:0 ENST00000651858.1:0 ENST00000651506.1:0 ENST00000658338.1:0 ENST00000651951.1:0 NR_038371:0 AK127870:0 ENST00000668489.1:3 ENST00000663138.1:-9 ENST00000663312.1:-9 ENST00000660958.1:-10 ENST00000654050.1:162
 |chr=chr7
 |cpg_percent=0.045
@@ Line 22: / Line 22: @@
 |nearest_refseq=NM_001001707
 |nearest_unigene=Hs.531378
-|num_trans=4
+|num_trans=31
 |species=human
 |start=53811930
 |start_of_center_position=53811936
 |strand=-
-|transcript_name=ENST00000380970.2 NR_038371 uc022adj.1 AK127870
+|transcript_name=ENST00000380970.2 ENST00000660945.1 ENST00000662931.1 ENST00000661502.1 ENST00000670945.1 ENST00000666213.1 ENST00000660413.1 ENST00000652440.1 ENST00000665927.1 ENST00000659794.1 ENST00000659250.1 ENST00000662259.1 ENST00000659481.1 ENST00000670507.1 ENST00000669638.1 ENST00000650830.1 ENST00000656718.1 ENST00000652104.1 ENST00000663872.1 ENST00000656885.1 ENST00000651858.1 ENST00000651506.1 ENST00000658338.1 ENST00000651951.1 NR_038371 AK127870
 |tss_classification=no
 |tss_id=hg_84131.1