TSS: Hg 100727.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=-38244 |entrez_id=9380 |gc_percent=0.457711 |gene_alias=GLXR|GLYD|PH2 |gene_description=glyoxylate and hydroxypyruvate reductase...") |
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{{TSSDetail | {{TSSDetail | ||
|GLYD= | |||
|PH2= | |||
|all_trans=ENST00000452923.1:27 uc064tcd.1:27 | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=27 | |||
|distance_to_tss=-38244 | |distance_to_tss=-38244 | ||
|end=37384472 | |||
|entrez_id=9380 | |entrez_id=9380 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_012203 | |nearest_refseq=NM_012203 | ||
|nearest_unigene=Hs.155742 | |nearest_unigene=Hs.155742 | ||
|num_trans=2 | |||
|species=human | |||
|start=37384460 | |||
|strand=- | |||
|transcript_name=ENST00000452923.1 uc064tcd.1 | |||
|tss_classification=no | |||
|tss_id=hg_100727.1 | |tss_id=hg_100727.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:12, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -38244 |
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| Nearest PromoterID: | NM_012203 |
| Entrez ID: | 9380 |
| Nearest Unigene: | Hs.155742 |
| Nearest Refseq: | NM_012203 |
| Nearest Ensembl: | ENSG00000137106 |
| Gene Name: | GRHPR |
| Gene Alias: | GLXR |
| Gene Description: | glyoxylate and hydroxypyruvate reductase |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |