TSS: Hg 109384.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-22 |entrez_id=101928687 |gc_percent=0.482587 |gene_alias=lnc-MBL2-4 |gene_description=long intergenic non-protein coding RNA 14...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000435813.6:15 NR_120642:15 uc001jjs.4:15 BC015429:15 | |||
|chr=chr10 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=15 | |||
|distance_to_tss=-22 | |distance_to_tss=-22 | ||
|end=52455301 | |||
|entrez_id=101928687 | |entrez_id=101928687 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
|gene_alias=lnc-MBL2-4 | |gene_alias=lnc-MBL2-4 | ||
|gene_description=long intergenic non-protein coding RNA 1468 | |gene_description=long intergenic non-protein coding RNA 1468 | ||
|gene_name=LINC01468 | |gene_id=101928687 | ||
|gene_name=long intergenic non-protein coding RNA 1468 | |||
|gene_source=HGNC:50913 | |||
|gene_symbol=LINC01468 | |||
|gene_synonyms=lnc-MBL2-4 | |||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:50913 | |||
|nearest_ensembl=ENSG00000231131 | |nearest_ensembl=ENSG00000231131 | ||
|nearest_promoter_id=NR_120642 | |nearest_promoter_id=NR_120642 | ||
|nearest_refseq=NR_120641 | |nearest_refseq=NR_120641 | ||
|nearest_unigene=Hs.380362 | |nearest_unigene=Hs.380362 | ||
|num_trans=4 | |||
|species=human | |||
|start=52455286 | |||
|strand=- | |||
|transcript_name=ENST00000435813.6 NR_120642 uc001jjs.4 BC015429 | |||
|tss_classification=yes | |||
|tss_id=hg_109384.1 | |tss_id=hg_109384.1 | ||
|tss_score=1 | |||
|uniprot_id= | |||
}} | }} | ||
Revision as of 00:25, 9 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -22 |
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| Nearest PromoterID: | NR_120642 |
| Entrez ID: | 101928687 |
| Nearest Unigene: | Hs.380362 |
| Nearest Refseq: | NR_120641 |
| Nearest Ensembl: | ENSG00000231131 |
| Gene Name: | long intergenic non-protein coding RNA 1468 |
| Gene Alias: | lnc-MBL2-4 |
| Gene Description: | long intergenic non-protein coding RNA 1468 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.