TSS: Hg 170707.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|HsT3226= | |HsT3226= | ||
|all_trans=NM_152721: | |all_trans=ENST00000382713.10:0 NM_152721:0 LF212753:-104 MA448330:-104 LF213431:114 MA449008:114 AY599248:135 BC096744:135 AB528935:322 LF344125:-469 MA579702:-469 | ||
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
|distance= | |distance=0 | ||
|distance_to_tss=- | |distance_to_tss=-2 | ||
|end=69400920 | |end=69400920 | ||
|end_of_center_position=69400886 | |end_of_center_position=69400886 | ||
|entrez_id=220164 | |entrez_id=220164 | ||
|gc_percent=0.865672 | |gc_percent=0.865672 | ||
|gene_alias=DOK5L | |gene_alias=DOK5L{{!}}HsT3226 | ||
|gene_description=docking protein 6 | |gene_description=docking protein 6 | ||
|gene_id=220164 | |gene_id=220164 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_152721 | |nearest_refseq=NM_152721 | ||
|nearest_unigene=Hs.278285 | |nearest_unigene=Hs.278285 | ||
|num_trans= | |num_trans=11 | ||
|species=human | |species=human | ||
|start=69400851 | |start=69400851 | ||
|start_of_center_position=69400885 | |start_of_center_position=69400885 | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_152721 | |transcript_name=ENST00000382713.10 NM_152721 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_170707.1 | |tss_id=hg_170707.1 | ||
Revision as of 19:25, 16 June 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -2 |
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| Nearest PromoterID: | NM_152721 |
| Entrez ID: | 220164 |
| Nearest Unigene: | Hs.278285 |
| Nearest Refseq: | NM_152721 |
| Nearest Ensembl: | ENSG00000206052 |
| Gene Name: | docking protein 6 |
| Gene Alias: | DOK5L|HsT3226 |
| Gene Description: | docking protein 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.865672 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.