TSS: Hg 237191.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|KIAA1713=
|KIAA1713=
|all_trans=ENST00000586596.5:-1 uc060oip.1:-1 ENST00000592541.5:-23 uc060oio.1:-23 ENST00000590189.5:-26 uc060oin.1:-26 ENST00000593195.5:-35 ENST00000269197.9:-35 uc060oim.1:-35 uc010dmg.2:-35 ENST00000592288.5:-52 uc060oil.1:-52 AK131454:-52 NM_030632:-90 ENST00000592349.5:104 uc060oiq.1:104 ENST00000586948.1:215 uc060oir.1:215
|all_trans=ENST00000316249.3:-128 NM_012283:-128 AJ011021:-128 BC169276:-129 BC169277:156
|chr=chr18
|chr=chr18
|cpg_percent=0.13
|cpg_percent=0.13
|distance=-1
|distance=-128
|distance_to_tss=90
|distance_to_tss=448
|end=33578667
|end=33578667
|end_of_center_position=79863796
|end_of_center_position=79863796
|entrez_id=80816
|entrez_id=80816
|gc_percent=0.701493
|gc_percent=0.701493
|gene_alias=BRPS
|gene_alias=BRPS{{!}}KIAA1713
|gene_description="additional sex combs like 3, transcriptional regulator"
|gene_description=ASXL transcriptional regulator 3
|gene_id=80816
|gene_id=26251
|gene_name="additional sex combs like 3, transcriptional regulator"
|gene_name=potassium voltage-gated channel modifier subfamily G member 2
|gene_source=HGNC:29357
|gene_source=HGNC:6249
|gene_symbol=ASXL3
|gene_symbol=KCNG2
|gene_synonyms=
|gene_synonyms=KCNF2 Kv6.2
|gene_type=protein-coding
|gene_type=protein-coding
|hgnc_mgi_id=HGNC:29357
|hgnc_mgi_id=HGNC:6249
|nearest_ensembl=ENSG00000141431
|nearest_ensembl=ENSG00000141431
|nearest_promoter_id=NM_030632
|nearest_promoter_id=NM_030632
|nearest_refseq=NM_030632
|nearest_refseq=NM_030632
|nearest_unigene=Hs.464876
|nearest_unigene=Hs.464876
|num_trans=18
|num_trans=5
|species=human
|species=human
|start=33578666
|start=33578666
|start_of_center_position=79863795
|start_of_center_position=79863795
|strand=+
|strand=+
|transcript_name=ENST00000586596.5 uc060oip.1
|transcript_name=ENST00000316249.3 NM_012283 AJ011021
|tss_classification=yes
|tss_classification=yes
|tss_id=hg_237191.1
|tss_id=hg_237191.1
|tss_score=1
|tss_score=1
|uniprot_id=K7EKI3
|uniprot_id=Q9UJ96
}}
}}

Revision as of 14:14, 17 June 2021

Basic information about the TSS


TSS ID:hg_237191.1
Species:human
Chr:chr18
Start:33578666
End:33578667
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:ENST00000316249.3 NM_012283 AJ011021
Distance:-128
GeneID:26251
HGNC/MGI_ID:HGNC:6249
UniProt_ID:Q9UJ96
Gene_name:potassium voltage-gated channel modifier subfamily G member 2
Gene_symbol:KCNG2
Gene_synonyms:KCNF2 Kv6.2
Gene_source:HGNC:6249



TATA-Box annotation


Distance to TSS:448
Nearest PromoterID:NM_030632
Entrez ID:80816
Nearest Unigene:Hs.464876
Nearest Refseq:NM_030632
Nearest Ensembl:ENSG00000141431
Gene Name:potassium voltage-gated channel modifier subfamily G member 2
Gene Alias:BRPS|KIAA1713
Gene Description:ASXL transcriptional regulator 3
Gene Type:protein-coding
CpG%:0.13
GC%:0.701493
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.