TSS: Hg 10076.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=-90388 |entrez_id=9341 |gc_percent=0.696517 |gene_alias=CEB |gene_description=vesicle associated membrane protein 3 |gene_name=V...") |
No edit summary |
||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|chr=chr1 | |||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance= | |||
|distance_to_tss=-90388 | |distance_to_tss=-90388 | ||
|end=7680891 | |||
|entrez_id=9341 | |entrez_id=9341 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
Line 12: | Line 15: | ||
|nearest_refseq=NM_004781 | |nearest_refseq=NM_004781 | ||
|nearest_unigene=Hs.66708 | |nearest_unigene=Hs.66708 | ||
|num_trans=0 | |||
|species=human | |||
|start=7680870 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_10076.1 | |tss_id=hg_10076.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 18:14, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | -90388 |
---|---|
Nearest PromoterID: | NM_004781 |
Entrez ID: | 9341 |
Nearest Unigene: | Hs.66708 |
Nearest Refseq: | NM_004781 |
Nearest Ensembl: | ENSG00000049245 |
Gene Name: | VAMP3 |
Gene Alias: | CEB |
Gene Description: | vesicle associated membrane protein 3 |
Gene Type: | protein-coding |
CpG%: | 0.13 |
GC%: | 0.696517 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |