TSS: Hg 100780.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=1428 |entrez_id=158228 |gc_percent=0.651741 |gene_alias=C9orf122 |gene_description=family with sequence similarity 201 member A...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
|distance= | |||
|distance_to_tss=1428 | |distance_to_tss=1428 | ||
|end=38622528 | |||
|entrez_id=158228 | |entrez_id=158228 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NR_027294 | |nearest_refseq=NR_027294 | ||
|nearest_unigene=Hs.632652 | |nearest_unigene=Hs.632652 | ||
|num_trans=0 | |||
|species=human | |||
|start=38622504 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_100780.1 | |tss_id=hg_100780.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:15, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1428 |
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| Nearest PromoterID: | NR_027294 |
| Entrez ID: | 158228 |
| Nearest Unigene: | Hs.632652 |
| Nearest Refseq: | NR_027294 |
| Nearest Ensembl: | |
| Gene Name: | FAM201A |
| Gene Alias: | C9orf122 |
| Gene Description: | family with sequence similarity 201 member A |
| Gene Type: | ncRNA |
| CpG%: | 0.08 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |