TSS: Hg 143922.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|NY-REN-28=
|NY-REN-28=
|all_trans=ENST00000256379.10:0 ENST00000430055.6:0 ENST00000440435.2:0 ENST00000553611.5:0 ENST00000556044.5:0 ENST00000556495.5:0 ENST00000554870.5:0 ENST00000556423.1:0 NM_005466:0 AK222587:0 LP895303:0 AK300460:0 AK223346:0 AK290647:0 BC004106:0 LF384865:0 MA620442:0 AK304361:0 AF074723:0 U78082:0 AK300417:0 ENST00000554963.5:1 KJ892891:5 ENST00000615788.4:-7 NM_001284211:-7 NM_001284210:-7 NM_001284209:-7 BT006831:7 AB463868:7 CR541697:7 LF329903:265 MA565480:265
|all_trans=HGNC:19970
|chr=chr14
|chr=chr14
|cpg_percent=0.075
|cpg_percent=0.075
Line 23: Line 23:
|nearest_refseq=NM_005466
|nearest_refseq=NM_005466
|nearest_unigene=Hs.497353
|nearest_unigene=Hs.497353
|num_trans=32
|num_trans=10001
|species=human
|species=human
|start=70600643
|start=70600643
|start_of_center_position=70600663
|start_of_center_position=70600663
|strand=-
|strand=-
|transcript_name=ENST00000256379.10 ENST00000430055.6 ENST00000440435.2 ENST00000553611.5 ENST00000556044.5 ENST00000556495.5 ENST00000554870.5 ENST00000556423.1 NM_005466 AK222587 LP895303 AK300460 AK223346 AK290647 BC004106 LF384865 MA620442 AK304361 AF074723 U78082 AK300417
|transcript_name=ENST00000256379.10 ENST00000430055.6 ENST00000440435.2 ENST00000553611.5 ENST00000556044.5 ENST00000556495.5 ENST00000554870.5 ENST00000556423.1 AK222587 AK300460 AK223346 AK290647 BC004106 AK304361 AF074723 U78082 AK300417
|tss_classification=no
|tss_classification=no
|tss_id=hg_143922.1
|tss_id=hg_143922.1

Latest revision as of 09:29, 20 July 2021

Basic information about the TSS

TSS ID:hg_143922.1
Species:human
Chr:chr14
Start:70600643
End:70600683
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:ENST00000256379.10 ENST00000430055.6 ENST00000440435.2 ENST00000553611.5 ENST00000556044.5 ENST00000556495.5 ENST00000554870.5 ENST00000556423.1 AK222587 AK300460 AK223346 AK290647 BC004106 AK304361 AF074723 U78082 AK300417
Distance:0
GeneID:10001
HGNC/MGI_ID:HGNC:19970
UniProt_ID:A8K3N2 B4DTY4 O75586
Gene_name:mediator complex subunit 6
Gene_symbol:MED6
Gene_synonyms:NY-REN-28
Gene_source:HGNC:19970



TATA-Box annotation

Distance to TSS:27
Nearest PromoterID:NM_001284209
Entrez ID:10001
Nearest Unigene:Hs.497353
Nearest Refseq:NM_005466
Nearest Ensembl:ENSG00000133997
Gene Name:mediator complex subunit 6
Gene Alias:ARC33|NY-REN-28
Gene Description:mediator complex subunit 6
Gene Type:protein-coding
CpG%:0.075
GC%:0.542289
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.

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