TSS: Hg 100793.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=1233 |entrez_id=103352539 |gc_percent=0.726368 |gene_alias=- |gene_description=long intergenic non-protein coding RNA 1410 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=BC011779:-1 BC065527:44 uc064tkd.1:245 | |||
|chr=chr9 | |||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
|distance=-1 | |||
|distance_to_tss=1233 | |distance_to_tss=1233 | ||
|end=62802713 | |||
|entrez_id=103352539 | |entrez_id=103352539 | ||
|gc_percent=0.726368 | |gc_percent=0.726368 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NR_121647 | |nearest_refseq=NR_121647 | ||
|nearest_unigene=Hs.351215 | |nearest_unigene=Hs.351215 | ||
|num_trans=3 | |||
|species=human | |||
|start=62802682 | |||
|strand=- | |||
|transcript_name=BC011779 | |||
|tss_classification=yes | |||
|tss_id=hg_100793.1 | |tss_id=hg_100793.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:15, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 1233 |
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| Nearest PromoterID: | NR_121647 |
| Entrez ID: | 103352539 |
| Nearest Unigene: | Hs.351215 |
| Nearest Refseq: | NR_121647 |
| Nearest Ensembl: | ENSG00000238113 |
| Gene Name: | LINC01410 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1410 |
| Gene Type: | ncRNA |
| CpG%: | 0.085 |
| GC%: | 0.726368 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |