TSS: Hg 159281.1: Difference between revisions

Latest revision as of 15:04, 20 July 2021

Basic information about the TSS

TSS ID:	hg_159281.1
Species:	human
Chr:	chr17

Start:	7583842
End:	7583863
Strand:	+

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 16)

Gene and protein annotation

Transcript_name:	ENST00000571391.5 ENST00000578267.5 ENST00000585188.5 ENST00000359822.10 ENST00000580708.5 ENST00000580834.5 ENST00000572836.5 ENST00000577088.5 ENST00000250124.11 ENST00000584378.5 ENST00000423172.6 ENST00000576066.5 ENST00000584479.5 ENST00000572719.5 ENST00000579445.5 AK225401 AK075299 AF038961 AK027742 AK297691 AK314527 AK297001 AK225432 AK055923 AK300083 AK300140 CU674920 HQ448685 KR709838 KR709839 KR709840 KU178478 KU178479 KU178480 DQ499597
Distance:	0
GeneID:	9526
HGNC/MGI_ID:	HGNC:7207
UniProt_ID:	A0A0S2Z4T4 A0A0S2Z4W8 B2RB74 B4DTB4 I3L1D2 I3L295 I3L4E0 J3KT75 J3QRD5 J3QS48 O75352 Q1HDL3 Q96K24 Q96N63

Gene_name:	mannose-P-dolichol utilization defect 1
Gene_symbol:	MPDU1
Gene_synonyms:	CDGIf Lec35 PQLC5 SL15 SLC66A5
Gene_source:	HGNC:7207

TATA-Box annotation

Distance to TSS:	1
Nearest PromoterID:	NM_004870
Entrez ID:	9526
Nearest Unigene:	Hs.246381
Nearest Refseq:	NM_004870
Nearest Ensembl:	ENSG00000129255
Gene Name:	mannose-P-dolichol utilization defect 1
Gene Alias:	CDGIF\|HBEBP2BPA\|Lec35\|My008\|PP3958\|PQLC5\|SL15\|SLC66A5
Gene Description:	mannose-P-dolichol utilization defect 1
Gene Type:	protein-coding
CpG%:	0.12
GC%:	0.60199
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 6: / Line 6: @@
 |PQLC5=
 |SL15=
-|all_trans=ENST00000571391.5:0 ENST00000578267.5:0 ENST00000585188.5:0 ENST00000359822.10:0 ENST00000580708.5:0 ENST00000580834.5:0 ENST00000572836.5:0 ENST00000577088.5:0 ENST00000250124.11:0 ENST00000584378.5:0 ENST00000423172.6:0 ENST00000576066.5:0 ENST00000584479.5:0 ENST00000572719.5:0 ENST00000579445.5:0 NM_004870:0 AK225401:0 AK075299:0 AF038961:0 AK027742:0 AK297691:0 AK314527:0 AK297001:0 AK225432:0 AK055923:0 AK300083:0 AK300140:0 CU674920:0 HQ448685:0 KJ898044:0 KR709838:0 KR709839:0 KR709840:0 KU178478:0 KU178479:0 KU178480:0 DQ499597:0 ENST00000581886.5:2 ENST00000575256.1:7 BC001898:-7 ENST00000570458.5:11 ENST00000585217.5:12 ENST00000396501.8:-15 ENST00000571822.5:-22 ENST00000576272.5:22 ENST00000581380.1:30 ENST00000574558.1:32 AF059752:-35 DQ585508:63 ENST00000572936.5:-177 NM_001330073:-196 NR_024603:-196 KY814480:-196 KY814481:-196 LF384756:-196 MA620333:-196 LF326383:218 MA561960:218 ENST00000582151.1:-314
+|all_trans=HGNC:7207
 |chr=chr17
 |cpg_percent=0.12
@@ Line 28: / Line 28: @@
 |nearest_refseq=NM_004870
 |nearest_unigene=Hs.246381
-|num_trans=59
+|num_trans=9526
 |species=human
 |start=7583842
 |start_of_center_position=7583852
 |strand=+
-|transcript_name=ENST00000571391.5 ENST00000578267.5 ENST00000585188.5 ENST00000359822.10 ENST00000580708.5 ENST00000580834.5 ENST00000572836.5 ENST00000577088.5 ENST00000250124.11 ENST00000584378.5 ENST00000423172.6 ENST00000576066.5 ENST00000584479.5 ENST00000572719.5 ENST00000579445.5 NM_004870 AK225401 AK075299 AF038961 AK027742 AK297691 AK314527 AK297001 AK225432 AK055923 AK300083 AK300140 CU674920 HQ448685 KJ898044 KR709838 KR709839 KR709840 KU178478 KU178479 KU178480 DQ499597
+|transcript_name=ENST00000571391.5 ENST00000578267.5 ENST00000585188.5 ENST00000359822.10 ENST00000580708.5 ENST00000580834.5 ENST00000572836.5 ENST00000577088.5 ENST00000250124.11 ENST00000584378.5 ENST00000423172.6 ENST00000576066.5 ENST00000584479.5 ENST00000572719.5 ENST00000579445.5 AK225401 AK075299 AF038961 AK027742 AK297691 AK314527 AK297001 AK225432 AK055923 AK300083 AK300140 CU674920 HQ448685 KR709838 KR709839 KR709840 KU178478 KU178479 KU178480 DQ499597
 |tss_classification=yes
 |tss_id=hg_159281.1