TSS: Hg 160972.1: Difference between revisions

Latest revision as of 15:40, 20 July 2021

Basic information about the TSS

TSS cluster detected^*

* The number of TSS cluster called studies (maximum 16)

Gene and protein annotation

Transcript_name:	ENST00000588056.2 ENST00000251413.8 ENST00000591509.5 ENST00000589688.2 ENST00000589613.1 AK313339 BC000619 M61764 AK311637
Distance:	0
GeneID:	7283
HGNC/MGI_ID:	HGNC:12417
UniProt_ID:	K7EIS0 K7EKE5 P23258

TATA-Box annotation

Distance to TSS:	3
Nearest PromoterID:	NM_001070
Entrez ID:	7283
Nearest Unigene:	Hs.279669
Nearest Refseq:	NM_001070
Nearest Ensembl:	ENSG00000131462
Gene Name:	tubulin gamma 1
Gene Alias:	CDCBM4\|GCP-1\|TUBG\|TUBGCP1
Gene Description:	tubulin gamma 1
Gene Type:	protein-coding
CpG%:	0.105
GC%:	0.641791
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetail
-|all_trans=ENST00000588056.2:0 ENST00000251413.8:0 ENST00000591509.5:0 ENST00000589688.2:0 ENST00000589613.1:0 NM_001070:0 AK313339:0 BC000619:0 M61764:0 AK311637:0 ENST00000681490.1:-2 ENST00000681947.1:-2 ENST00000680678.1:-2 ENST00000681413.1:-2 ENST00000680672.1:-2 ENST00000680617.1:5 ENST00000681919.1:5 ENST00000681114.1:5 KJ892331:6 CR407642:8 BT019931:8 DQ891925:8 DQ895110:8 L77579:15 LF384804:-303 MA620381:-303
+|all_trans=HGNC:12417
 |chr=chr17
 |cpg_percent=0.105
@@ Line 22: / Line 22: @@
 |nearest_refseq=NM_001070
 |nearest_unigene=Hs.279669
-|num_trans=26
+|num_trans=7283
 |species=human
 |start=42609642
 |start_of_center_position=42609686
 |strand=+
-|transcript_name=ENST00000588056.2 ENST00000251413.8 ENST00000591509.5 ENST00000589688.2 ENST00000589613.1 NM_001070 AK313339 BC000619 M61764 AK311637
+|transcript_name=ENST00000588056.2 ENST00000251413.8 ENST00000591509.5 ENST00000589688.2 ENST00000589613.1 AK313339 BC000619 M61764 AK311637
 |tss_classification=yes
 |tss_id=hg_160972.1