TSS: Hg 100835.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=612 |entrez_id=100507299 |gc_percent=0.457711 |gene_alias=MAMDC2-AS2 |gene_description=SMC5 antisense RNA 1 (head to head) |gene...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr9 | |||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance= | |||
|distance_to_tss=612 | |distance_to_tss=612 | ||
|end=70258274 | |||
|entrez_id=100507299 | |entrez_id=100507299 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NR_039990 | |nearest_refseq=NR_039990 | ||
|nearest_unigene=Hs.556816 | |nearest_unigene=Hs.556816 | ||
|num_trans=0 | |||
|species=human | |||
|start=70258249 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_100835.1 | |tss_id=hg_100835.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:17, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 612 |
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| Nearest PromoterID: | NR_039990 |
| Entrez ID: | 100507299 |
| Nearest Unigene: | Hs.556816 |
| Nearest Refseq: | NR_039990 |
| Nearest Ensembl: | |
| Gene Name: | SMC5-AS1 |
| Gene Alias: | MAMDC2-AS2 |
| Gene Description: | SMC5 antisense RNA 1 (head to head) |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |