TSS: Hg 231372.1: Difference between revisions
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{{TSSDetail | {{TSSDetail | ||
|SCXB= | |SCXB= | ||
|all_trans= | |all_trans=HGNC:32322 | ||
|bHLHa48= | |bHLHa48= | ||
|chr=chr8 | |chr=chr8 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_001008271 | |nearest_refseq=NM_001008271 | ||
|nearest_unigene=Hs.553250 | |nearest_unigene=Hs.553250 | ||
|num_trans= | |num_trans=642658 | ||
|species=human | |species=human | ||
|start=144266445 | |start=144266445 | ||
| Line 30: | Line 30: | ||
|strand=+ | |strand=+ | ||
|tata_box=-34(CGCTATAAAGGC,-,0.00) | |tata_box=-34(CGCTATAAAGGC,-,0.00) | ||
|transcript_name=ENST00000567180.3 | |transcript_name=ENST00000567180.3 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_231372.1 | |tss_id=hg_231372.1 | ||
Latest revision as of 10:48, 21 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2 |
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| Nearest PromoterID: | NM_001080514 |
| Entrez ID: | 642658 |
| Nearest Unigene: | Hs.553250 |
| Nearest Refseq: | NM_001008271 |
| Nearest Ensembl: | ENSG00000260428 |
| Gene Name: | scleraxis bHLH transcription factor |
| Gene Alias: | SCXA|SCXB|bHLHa48 |
| Gene Description: | scleraxis bHLH transcription factor |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.830846 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -34(CGCTATAAAGGC,-,0.00) |
TSS expression
Expression data not found.