TSS: Hg 40699.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|SDHALP2=
|SDHALP2=
|all_trans=ENST00000457233.5:0 ENST00000452844.5:0 ENST00000429897.5:0 ENST00000453324.5:0 BC062438:0 AK057553:0 BC073879:0 ENST00000445430.5:1 BC064564:1 BC053551:-11 ENST00000425425.1:17 AK074764:17 ENST00000455183.1:20 NR_003265:-20
|all_trans=HGNC:27408 HGNC:53807
|chr=chr3
|chr=chr3
|cpg_percent=0.145
|cpg_percent=0.145
Line 23: Line 23:
|nearest_refseq=NR_003265
|nearest_refseq=NR_003265
|nearest_unigene=Hs.596261
|nearest_unigene=Hs.596261
|num_trans=14
|num_trans=727956
|species=human
|species=human
|start=195658058
|start=195658058

Latest revision as of 21:17, 21 July 2021

Basic information about the TSS

TSS ID:hg_40699.1
Species:human
Chr:chr3
Start:195658058
End:195658076
Strand:+
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation

Transcript_name:ENST00000457233.5 ENST00000452844.5 ENST00000429897.5 ENST00000453324.5 BC062438 AK057553 BC073879
Distance:0
GeneID:727956
HGNC/MGI_ID:HGNC:27408 HGNC:53807
UniProt_ID:
Gene_name:MUC20 overlapping transcript; succinate dehydrogenase complex flavoprotein subunit A pseudogene 2
Gene_symbol:MUC20-OT1 SDHAP2
Gene_synonyms:
Gene_source:HGNC:27408 HGNC:53807



TATA-Box annotation

Distance to TSS:28
Nearest PromoterID:NR_003265
Entrez ID:727956
Nearest Unigene:Hs.596261
Nearest Refseq:NR_003265
Nearest Ensembl:ENSG00000242086
Gene Name:MUC20 overlapping transcript; succinate dehydrogenase complex flavoprotein subunit A pseudogene 2
Gene Alias:SDHAL2|SDHALP2
Gene Description:succinate dehydrogenase complex flavoprotein subunit A pseudogene 2
Gene Type:pseudo
CpG%:0.145
GC%:0.756219
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.

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