TSS: Hg 63024.1: Difference between revisions

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{{TSSDetail
{{TSSDetail
|all_trans=ENST00000456936.4:25 ENST00000503010.1:25 NM_001164468:25 NM_181836:25 AK075218:25 AK304210:25 BC019349:36 ENST00000333314.3:47 AY304583:47 AY304584:47 AK074962:62 ENST00000282382.8:-85 AK027512:-97 NM_001164469:-103 AY304581:269 HQ447119:269 KJ893779:269 CU676434:269 AF151867:374
|all_trans=HGNC:24253 HGNC:33945
|chr=chr5
|chr=chr5
|cpg_percent=0.1
|cpg_percent=0.1
Line 22: Line 22:
|nearest_refseq=NM_181836
|nearest_refseq=NM_181836
|nearest_unigene=Hs.642817
|nearest_unigene=Hs.642817
|num_trans=19
|num_trans=100302736 51014
|species=human
|species=human
|start=115626060
|start=115626060
|start_of_center_position=115626068
|start_of_center_position=115626068
|strand=-
|strand=-
|transcript_name=ENST00000456936.4 ENST00000503010.1 NM_001164468 NM_181836 AK075218 AK304210
|transcript_name=ENST00000456936.4 ENST00000503010.1 AK075218 AK304210
|tss_classification=yes
|tss_classification=yes
|tss_id=hg_63024.1
|tss_id=hg_63024.1

Latest revision as of 05:22, 22 July 2021

Basic information about the TSS


TSS ID:hg_63024.1
Species:human
Chr:chr5
Start:115626060
End:115626076
Strand:-
TSS cluster detected*

  * The number of TSS cluster called studies (maximum 16)



Gene and protein annotation


Transcript_name:ENST00000456936.4 ENST00000503010.1 AK075218 AK304210
Distance:25
GeneID:100302736 51014
HGNC/MGI_ID:HGNC:24253 HGNC:33945
UniProt_ID:B4E2C1 Q86XR7 Q9Y3B3
Gene_name:TMED7-TICAM2 readthrough; transmembrane p24 trafficking protein 7
Gene_symbol:TMED7 TMED7-TICAM2
Gene_synonyms:CGI-109 FLJ90481 p24g3 p24gamma3
Gene_source:HGNC:24253 HGNC:33945



TATA-Box annotation


Distance to TSS:-32
Nearest PromoterID:NM_181836
Entrez ID:51014
Nearest Unigene:Hs.642817
Nearest Refseq:NM_181836
Nearest Ensembl:ENSG00000134970
Gene Name:TMED7-TICAM2 readthrough; transmembrane p24 trafficking protein 7
Gene Alias:CGI-109|p24g3|p24gamma3|p27
Gene Description:transmembrane p24 trafficking protein 7
Gene Type:protein-coding
CpG%:0.1
GC%:0.651741
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):



TSS expression

Expression data not found.