TSS: Hg 100933.1: Difference between revisions
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000377044.8:-5 NM_013390:-5 NM_001135820:-5 uc011lsa.1:-5 AK056807:308 ENST00000543165.1:342 uc064trx.1:342 AK300405:342 AF137030:363 AB037833:378 BC146780:378 ENST00000377066.9:469 ENST00000542935.5:469 uc010mos.3:469 uc064trr.1:469 BC140773:469 BC144510:469 BC171782:469 | |||
|chr=chr9 | |||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=-5 | |||
|distance_to_tss=17 | |distance_to_tss=17 | ||
|end=71768879 | |||
|entrez_id=23670 | |entrez_id=23670 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=transmembrane protein 2 | |gene_description=transmembrane protein 2 | ||
|gene_name=TMEM2 | |gene_id=23670 | ||
|gene_name=transmembrane protein 2 | |||
|gene_source=HGNC:11869 | |||
|gene_symbol=TMEM2 | |||
|gene_synonyms= | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:11869 | |||
|nearest_ensembl=ENSG00000135048 | |nearest_ensembl=ENSG00000135048 | ||
|nearest_promoter_id=NM_001135820 | |nearest_promoter_id=NM_001135820 | ||
|nearest_refseq=NM_013390 | |nearest_refseq=NM_013390 | ||
|nearest_unigene=Hs.494146 | |nearest_unigene=Hs.494146 | ||
|num_trans=18 | |||
|species=human | |||
|start=71768854 | |||
|strand=- | |||
|transcript_name=ENST00000377044.8 NM_013390 NM_001135820 uc011lsa.1 | |||
|tss_classification=yes | |||
|tss_id=hg_100933.1 | |tss_id=hg_100933.1 | ||
|tss_score=1 | |||
|uniprot_id=A0A024R229 Q9UHN6 | |||
}} | }} | ||
Revision as of 18:21, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 17 |
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| Nearest PromoterID: | NM_001135820 |
| Entrez ID: | 23670 |
| Nearest Unigene: | Hs.494146 |
| Nearest Refseq: | NM_013390 |
| Nearest Ensembl: | ENSG00000135048 |
| Gene Name: | transmembrane protein 2 |
| Gene Alias: | - |
| Gene Description: | transmembrane protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.