TSS: Mm 109442.1: Difference between revisions
From referenceTSS
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|Rage= | |Rage= | ||
|Stk30= | |Stk30= | ||
|all_trans= | |all_trans=MGI:1913959 | ||
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NR_152102 | |nearest_refseq=NR_152102 | ||
|nearest_unigene=Mm.390504 | |nearest_unigene=Mm.390504 | ||
|num_trans= | |num_trans=66709 | ||
|species=mouse | |species=mouse | ||
|start=110841021 | |start=110841021 | ||
| Line 30: | Line 30: | ||
|strand=+ | |strand=+ | ||
|tata_box=-33(GGGTTTAAAAAC,-,0.00) | |tata_box=-33(GGGTTTAAAAAC,-,0.00) | ||
|transcript_name=ENSMUST00000181348.1 | |transcript_name=ENSMUST00000181348.1 AK014831 | ||
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_109442.1 | |tss_id=mm_109442.1 | ||
Latest revision as of 13:56, 26 July 2021
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 5)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 0 |
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| Nearest PromoterID: | NR_152102 |
| Entrez ID: | 66709 |
| Nearest Unigene: | Mm.390504 |
| Nearest Refseq: | NR_152102 |
| Nearest Ensembl: | |
| Gene Name: | RIKEN cDNA 4921507G05 gene |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 4921507G05 gene |
| Gene Type: | ncRNA |
| CpG%: | 0.095 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(GGGTTTAAAAAC,-,0.00) |
TSS expression
Expression data not found.