TSS: Hg 100965.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=-22055 |entrez_id=7763 |gc_percent=0.447761 |gene_alias=ZA20D2|ZFAND5A|ZNF216 |gene_description=zinc finger AN1-type containing...") |
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{{TSSDetail | {{TSSDetail | ||
|ZFAND5A= | |||
|ZNF216= | |||
|chr=chr9 | |||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance= | |||
|distance_to_tss=-22055 | |distance_to_tss=-22055 | ||
|end=72387305 | |||
|entrez_id=7763 | |entrez_id=7763 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_006007 | |nearest_refseq=NM_006007 | ||
|nearest_unigene=Hs.406096 | |nearest_unigene=Hs.406096 | ||
|num_trans=0 | |||
|species=human | |||
|start=72387299 | |||
|strand=- | |||
|tata_box="-62(CTGTTTATAGGG,-,0.00)" | |tata_box="-62(CTGTTTATAGGG,-,0.00)" | ||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100965.1 | |tss_id=hg_100965.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:23, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -22055 |
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| Nearest PromoterID: | NM_006007 |
| Entrez ID: | 7763 |
| Nearest Unigene: | Hs.406096 |
| Nearest Refseq: | NM_006007 |
| Nearest Ensembl: | ENSG00000107372 |
| Gene Name: | ZFAND5 |
| Gene Alias: | ZA20D2 |
| Gene Description: | zinc finger AN1-type containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-62(CTGTTTATAGGG,-,0.00)" |