TSS: Hg 100968.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=55450 |entrez_id=117531 |gc_percent=0.40796 |gene_alias=DFNA36|DFNB11|DFNB7 |gene_description=transmembrane channel like 1 |gen...") |
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{{TSSDetail | {{TSSDetail | ||
|DFNB11= | |||
|DFNB7= | |||
|chr=chr9 | |||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance= | |||
|distance_to_tss=55450 | |distance_to_tss=55450 | ||
|end=72577265 | |||
|entrez_id=117531 | |entrez_id=117531 | ||
|gc_percent=0.40796 | |gc_percent=0.40796 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_138691 | |nearest_refseq=NM_138691 | ||
|nearest_unigene=Hs.670211 | |nearest_unigene=Hs.670211 | ||
|num_trans=0 | |||
|species=human | |||
|start=72577237 | |||
|strand=- | |||
|tata_box="-28(GAATTTTAAAGC,-,0.00)" | |tata_box="-28(GAATTTTAAAGC,-,0.00)" | ||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_100968.1 | |tss_id=hg_100968.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 18:23, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 55450 |
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| Nearest PromoterID: | NM_138691 |
| Entrez ID: | 117531 |
| Nearest Unigene: | Hs.670211 |
| Nearest Refseq: | NM_138691 |
| Nearest Ensembl: | ENSG00000165091 |
| Gene Name: | TMC1 |
| Gene Alias: | DFNA36 |
| Gene Description: | transmembrane channel like 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.40796 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-28(GAATTTTAAAGC,-,0.00)" |