TSS: Hg 11170.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-230 |entrez_id=55057 |gc_percent=0.661692 |gene_alias=CRYBG2 |gene_description=absent in melanoma 1-like |gene_name=AIM1L |gen...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000308182.9:222 ENST00000475866.2:222 NM_001039775:222 uc001bmd.4:222 uc057dqu.1:222 AK000902:222 ENST00000374207.4:256 uc057dqt.1:256 | |||
|chr=chr1 | |||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=222 | |||
|distance_to_tss=-230 | |distance_to_tss=-230 | ||
|end=26354368 | |||
|entrez_id=55057 | |entrez_id=55057 | ||
|gc_percent=0.661692 | |gc_percent=0.661692 | ||
|gene_alias=CRYBG2 | |gene_alias=CRYBG2 | ||
|gene_description=absent in melanoma 1-like | |gene_description=absent in melanoma 1-like | ||
|gene_name=AIM1L | |gene_id=55057 | ||
|gene_name=absent in melanoma 1-like | |||
|gene_source=HGNC:17295 | |||
|gene_symbol=AIM1L | |||
|gene_synonyms=CRYBG2 FLJ38020 | |||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:17295 | |||
|nearest_ensembl=ENSG00000176092 | |nearest_ensembl=ENSG00000176092 | ||
|nearest_promoter_id=NM_001039775 | |nearest_promoter_id=NM_001039775 | ||
|nearest_refseq=NM_017977 | |nearest_refseq=NM_017977 | ||
|nearest_unigene=Hs.128738 | |nearest_unigene=Hs.128738 | ||
|num_trans=8 | |||
|species=human | |||
|start=26354351 | |||
|strand=- | |||
|transcript_name=ENST00000308182.9 ENST00000475866.2 NM_001039775 uc001bmd.4 uc057dqu.1 AK000902 | |||
|tss_classification=no | |||
|tss_id=hg_11170.1 | |tss_id=hg_11170.1 | ||
|tss_score=1 | |||
|uniprot_id=E7ET48 Q8N1P7 Q9NWG5 | |||
}} | }} | ||
Revision as of 02:04, 9 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -230 |
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| Nearest PromoterID: | NM_001039775 |
| Entrez ID: | 55057 |
| Nearest Unigene: | Hs.128738 |
| Nearest Refseq: | NM_017977 |
| Nearest Ensembl: | ENSG00000176092 |
| Gene Name: | absent in melanoma 1-like |
| Gene Alias: | CRYBG2 |
| Gene Description: | absent in melanoma 1-like |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.661692 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
TSS expression
Expression data not found.